rs5992873 chr22:17830278 G>A
- Sequence
ctgcacaggcaccgtcggctgccc[G/A]acagacacacctgcgctagggaca
- ASB in cell types
- HEK293 (embryonic kidney) liver K562 (myelogenous leukemia) foreskin keratinocyte
- ASB for transcription factors
- ZIC2_HUMAN RAD21_HUMAN TZAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZIC2_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.96 | 0.73 | 1.38 | n/a | n/a | |||
| TZAP_HUMAN | 2.13 | n/a | 2.00 | n/a | n/a |
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