rs5995262 chr22:36221932 A>G
- Sequence
cgttcaggctgagagggaggggga[A/G]caacagtgaaactccccacgccga
- ASB in cell types
- HEK293 (embryonic kidney) Th1-cells thyroid gland erythroid cells
- ASB for transcription factors
- SCRT2_HUMAN CTCF_HUMAN TBX21_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | n/a | 3.06 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.18 | 1.07 | 1.43 | n/a | No Hit | |||
| TBX21_HUMAN | -0.63 | 2.08 | 1.33 | n/a | No Hit | |||
| STAT1_HUMAN | 1.36 | -2.80 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Thyroid