rs5997112 chr22:26665827 G>A
- Sequence
tgattttcacacttcacatttggc[G/A]ttagggctagtatttcacaaacat
- ASB in cell types
- GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells) | 0.83 | 0.41 | 1.28 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Nerve_Tibial, Stomach, Whole_Blood