rs6001284 chr22:22195399 A>G
- Sequence
ggatgctgagcagaggccccctgg[A/G]cagtggctggagttgggagcagtg
- ASB in cell types
- K562 (myelogenous leukemia) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN MEIS2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 3.70 | n/a | 1.50 | n/a | No Hit | |||
| MEIS2_HUMAN | 2.21 | n/a | 4.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellar_Hemisphere, Colon_Transverse, Esophagus_Mucosa, Lung, Stomach, Whole_Blood