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rs600579 chr2:67446691 A>T

Sequence
tctaccttctgccataaacgtctc[A/T]ttttctctaatatccttatttgca
ASB in cell types
VCaP (prostate carcinoma) HEK293 (embryonic kidney)
ASB for transcription factors
SP7_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP7_HUMAN 3.05 -3.71 1.2·10-71.00 1.33 n/a n/a
ANDR_HUMAN 0.79 0.48 7.1·10-40.90 1.93 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) chronic kidney disease cystatin c in serum homa-b infant head circumference maternal transmission distortion obesity (body mass index (bmi))
GTEx eQTL Cells_Cultured_fibroblasts

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