ADASTRA v1.6.10
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rs600579
chr2:67446691
A
>
T
Sequence
tctaccttctgccataaacgtctc[A/T]ttttctctaatatccttatttgca
ASB in cell types
VCaP (prostate carcinoma)
HEK293 (embryonic kidney)
ASB for transcription factors
SP7_HUMAN
ANDR_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SP7_HUMAN
3.05
-3.71
1.2·10
-7
1.00
1.33
n/a
n/a
ANDR_HUMAN
0.79
0.48
7.1·10
-4
0.90
1.93
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
chronic kidney disease
,
cystatin c in serum
,
homa-b
,
infant head circumference
,
maternal transmission distortion
,
obesity (body mass index (bmi))
GTEx eQTL
Cells_Cultured_fibroblasts
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)