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rs6008735 chr22:48492539 A>G

Sequence
tctttctcgtgtgctgggatccat[A/G]tagaaggagatgggctccaccgtc
ASB in cell types
GM23338 HCT-116 (colon carcinoma)
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 0.14 1.82 1.001.8·10-3 1.48 n/a n/a
CTCF_HUMAN 0.43 0.89 1.007.4·10-3 1.44 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Muscle_Skeletal

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