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rs600988 chr1:236353369 C>T

Sequence
cactgtgcatgaggtgactgctta[C/T]acaaggagatgttacattaagatg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
TIF1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1A_HUMAN 2.32 n/a 0.031.00 2.75 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium bipolar disorder in alcoholics birth weight hdl cholesterol major depressive disorder triglycerides change with statins urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Testis

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