ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs601060
chr1:46673908
C
>
G
Sequence
acgtgagctatgttgatttacagt[C/G]gctatgtcacaggcaaaatgagtc
ASB for transcription factors
JUN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUN_HUMAN
-0.92
1.16
1.00
0.03
1.67
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
ldl cholesterol
,
total cholesterol
GTEx eQTL
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Esophagus_Mucosa
,
Liver
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Ovary
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)