rs60305148 chr15:72811799 C>T
- Sequence
tcaactattttttgcttatgtctg[C/T]caccttgctgctcaaggttgacaa
- ASB for transcription factors
- EP300_HUMAN CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | -2.11 | 2.34 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.94 | 0.19 | 1.17 | -2.27 | Concordant | |||
| SMC3_HUMAN | 1.52 | -1.27 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis