rs6033476 chr20:12661100 T>A
- Sequence
gcttttggaattcactgaaccaca[T/A]gggggcactaaatcctatgttcct
- ASB in cell types
- bipolar neuron IPSC-derived bipolar neuron pancreas neural progenitors
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.33 | 2.12 | 1.26 | 4.95 | Concordant |
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Motif analysis
