rs6040429 chr20:11207958 C>T
- Sequence
ttcggatatccagtggagtgaatg[C/T]ggcattcattaatgcccaatgtcg
- ASB in cell types
- HepG2 (hepatoblastoma) A549 (lung carcinoma) GM12878 (female B-cells) SK-N-SH (neuroblastoma)
- ASB for transcription factors
- ZNF24_HUMAN TEAD1_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZNF24_HUMAN | 1.30 | -1.59 | 1.33 | n/a | n/a | |||
| TEAD1_HUMAN | 1.79 | -0.71 | 1.42 | n/a | No Hit | |||
| JUN_HUMAN | 1.43 | 0.29 | 2.56 | n/a | No Hit |
Items per page:
1 – 3 of 3