rs604159 chr2:50275899 T>C
- Sequence
gtgtcaaaagccatgtttgtttaa[T/C]gtgcctgcattctgccaaataaat
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | n/a | 1.68 | 2.00 | 0.10 | Weak Concordant |
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Motif analysis
