rs605953 chr2:23594423 T>G
- Sequence
catttcgttcctcctggattgttc[T/G]aatcccagacactcaggagctcac
- ASB in cell types
- CWR22 (prostate carcinoma)
- ASB for transcription factors
- EP300_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 1.27 | 0.41 | 1.46 | n/a | n/a | |||
| ANDR_HUMAN | 1.02 | 0.02 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, fasting blood glucose, obesity with early age of onset (age >2), serum creatinine
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid