rs60650583 chr1:235241118 T>C
- Sequence
aaggaagtatctgaaaccatcaac[T/C]tgatgtttgaggaaagtgtagtaa
- ASB in cell types
- ALL-SIL (acute lymphoblastic leukemia)
- ASB for transcription factors
- TLX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TLX1_HUMAN | 2.13 | -2.47 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Hypothalamus, Cells_Cultured_fibroblasts, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood