rs6090874 chr20:48578608 A>G
- Sequence
tggctccctctggaggctcagggc[A/G]tggggggagaattcgttcttggcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- AP2C_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2C_HUMAN | 1.93 | n/a | 2.50 | -1.23 | Weak Concordant |
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Motif analysis
