rs60984070 chr19:28727775 C>T
- Sequence
agcgccccctcccggcaggcggac[C/T]gctgctctcgctcaagttctggcg
- ASB in cell types
- PANC1 (pancreatic ductal adenocarcinoma) RWPE2 22RV1 (prostate carcinoma) GM23338
- ASB for transcription factors
- CTCF_HUMAN MGAP_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.01 | -0.23 | 1.52 | -1.97 | Weak Concordant | |||
| MGAP_HUMAN | 2.30 | n/a | 2.00 | n/a | n/a |
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Motif analysis
