rs6103072 chr20:36384083 A>G
- Sequence
agtaactagctagaaaaaaaaaga[A/G]gctttcattgccacctcagcatgg
- ASB in cell types
- GM12878 (female B-cells) H1 (embryonic stem cells) HL-60 (acute myeloid leukemia) Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- REST_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 1.72 | -0.58 | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | 2.16 | -2.39 | 1.33 | n/a | No Hit |
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