rs6126998 chr20:53875690 C>T
- Sequence
atggcggcagtcacttccgctatg[C/T]ctcacgacacttctgctacgcctt
- ASB in cell types
- macrophages HL-60 (acute myeloid leukemia) K562 (myelogenous leukemia) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN CEBPG_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.58 | n/a | 2.50 | n/a | No Hit | |||
| CEBPG_HUMAN | 2.40 | -3.45 | 2.00 | n/a | No Hit | |||
| KAISO_HUMAN | 1.99 | -2.45 | 1.75 | 2.78 | Discordant |
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Motif analysis
