rs6141419 chr20:33732317 T>C
- Sequence
gaacagcgccagcctgggcggcct[T/C]gggcgggcgcgggaggggctccct
- ASB in cell types
- cranial neural crest cells CD14+ monocytes
- ASB for transcription factors
- AP2A_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2A_HUMAN | 2.48 | n/a | 2.00 | -3.27 | Concordant | |||
| STAT1_HUMAN | 1.86 | -0.25 | 2.17 | n/a | No Hit |
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Motif analysis
