rs61419297 chr21:34640365 G>A
- Sequence
atcgtgaataatgttgtcacagac[G/A]ttggtgtgaaaatactggtttgag
- ASB in cell types
- K562 (myelogenous leukemia) coronary artery smooth muscle
- ASB for transcription factors
- ATF1_HUMAN FOXM1_HUMAN JUND_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF1_HUMAN | 1.92 | -1.95 | 1.33 | n/a | No Hit | |||
| FOXM1_HUMAN | 1.99 | -1.89 | 1.33 | n/a | No Hit | |||
| JUND_HUMAN | 1.73 | -1.62 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid