rs61527589 chr1:16608312 C>T
- Sequence
agtaaaatcacttctacctgacca[C/T]ggcactgcagctcatgggcagcac
- ASB in cell types
- HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN SP130_HUMAN MLX_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.68 | -0.53 | 2.90 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.84 | -0.33 | 2.68 | n/a | No Hit | |||
| SP130_HUMAN | 3.07 | n/a | 1.33 | n/a | n/a | |||
| MLX_HUMAN | 3.05 | n/a | 1.50 | n/a | n/a | |||
| TEAD3_HUMAN | 2.67 | n/a | 1.33 | n/a | n/a |
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