rs61655220 chr20:57574079 C>T
- Sequence
tggacagcaccccctagaggtgtg[C/T]gttgcacctctcctctcagagccc
- ASB in cell types
- Peyer's patch RH4 (alveolar rhabdomyosarcoma) OCI-LY7 (diffuse large B-cell lymphoma) H1 (embryonic stem cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.48 | 1.99 | 1.58 | n/a | No Hit | |||
| RAD21_HUMAN | -1.79 | 1.72 | 1.33 | n/a | n/a |
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