ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs616597
chr3:101850882
A
>
C
Sequence
aatatgtgtttaggaccttttctt[A/C]cccacttggccttcatctggctga
ASB in cell types
GM12878 (female B-cells)
monocyte-derived macrophages
ASB for transcription factors
SMAD1_HUMAN
TF65_HUMAN
FOXK2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMAD1_HUMAN
2.49
n/a
1.9·10
-4
1.00
1.33
n/a
n/a
TF65_HUMAN
n/a
2.50
1.00
3.0·10
-3
2.50
n/a
No Hit
FOXK2_HUMAN
1.89
n/a
5.4·10
-3
1.00
1.33
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
EMBL-EBI
ulcerative colitis
GRASP
adiponectin levels
,
college completion
,
ldl cholesterol
,
refractive error
,
schizophrenia
,
total cholesterol
,
years of education
GTEx eQTL
Adipose_Subcutaneous
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)