rs617617 chr11:75547685 G>A
- Sequence
ccactgctggggtacatcacccta[G/A]gaagcccctcaaagagatagaaaa
- ASB in cell types
- K562 (myelogenous leukemia) HeLa S3 (cervical adenocarcinoma) CD34+ stem cells-derived erythroblasts GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.81 | 0.32 | 1.53 | n/a | No Hit | |||
| NFIC_HUMAN | -2.09 | 2.17 | 2.00 | n/a | No Hit |
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