rs61763285 chr1:5286489 G>A
- Sequence
tcaatgtacaggcactgtttccac[G/A]tatctgtcacccactgctgcataa
- ASB in cell types
- VCaP (prostate carcinoma) neural cell neural progenitors esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.30 | 1.56 | 1.42 | n/a | No Hit | |||
| SMC3_HUMAN | -1.31 | 1.38 | 1.00 | n/a | n/a |
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