rs617687 chr2:45664839 G>C
- Sequence
aggctttttttcacatcccatttt[G/C]tgtggtccaggtgtatatcccatt
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.55 | 1.36 | 1.33 | n/a | No Hit | |||
| SPI1_HUMAN | -1.00 | 1.13 | 1.33 | 0.20 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP diastolic blood pressure (dbp), fasting insulin, hdl cholesterol change with statins, homa-ir, infant head circumference, systolic blood pressure (sbp)