rs618001 chr11:86045320 C>T
- Sequence
aaaaaatatctctatcctcataca[C/T]ctcataaccatacacctgttctta
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.71 | -3.59 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, ldl cholesterol change with statins, response to lithium treatment for bipolar disorder, serum creatinine, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood