ADASTRA v1.6.10
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rs61802
chr12:29726467
G
>
A
Sequence
agctctccctagatttttagtaaa[G/A]tccttttcaatctacgtctgattc
ASB in cell types
HEK293 (embryonic kidney)
GM12878 (female B-cells)
ASB for transcription factors
PRD10_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRD10_HUMAN
2.29
-2.59
1.3·10
-3
1.00
1.50
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
ldl cholesterol
,
ldl cholesterol change with statins
,
mitral annular calcium
,
total cholesterol
,
years of education
GTEx eQTL
Colon_Sigmoid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)