rs618249 chr11:95153296 G>T
- Sequence
ggttgttgtcagaaaaagttaaac[G/T]tcgtaatgaaagtgaaactgcgtt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN MTG16_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.79 | 1.29 | 1.78 | n/a | n/a | |||
| MTG16_HUMAN | n/a | 0.51 | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | -0.27 | 1.71 | 2.00 | n/a | n/a |
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