rs61839100 chr10:38527984 C>G
- Sequence
aatggataggaacagaaaggaatg[C/G]aatggaatgcaatggactcgaatg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) esophagus muscularis mucosa 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.29 | 1.22 | 2.74 | n/a | No Hit | |||
| EP300_HUMAN | -0.24 | 1.18 | 1.72 | n/a | n/a |
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