rs61839103 chr10:38528169 A>T
- Sequence
aaagaaatggactctaatggaatg[A/T]aatgttgtggacttgaatggaata
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN ATM_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.83 | 2.14 | 1.92 | n/a | No Hit | |||
| ZFX_HUMAN | n/a | 2.32 | 3.33 | n/a | No Hit | |||
| ATM_HUMAN | n/a | 2.57 | 3.00 | n/a | n/a | |||
| EP300_HUMAN | -1.17 | 1.43 | 2.30 | n/a | n/a | |||
| FOXA2_HUMAN | n/a | 2.34 | 4.00 | n/a | No Hit |
Items per page:
1 – 5 of 17