ADASTRA v1.6.10
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rs61840138
chr1:223102899
T
>
C
Sequence
gctaaaactgcaactccgcattct[T/C]attccaagcccagaagaagccagc
ASB in cell types
L1236 (Hodgkin lymphoma)
ASB for transcription factors
NFKB1_HUMAN
NFKB2_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFKB1_HUMAN
-3.00
2.67
1.00
1.5·10
-5
1.50
n/a
No Hit
NFKB2_HUMAN
-2.54
2.04
1.00
0.04
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)