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rs61859067 chr10:86400240 G>A

Sequence
gggagctgcaccatgcggtccggg[G/A]cgagtcggctgacacgcgcgctca
ASB in cell types
T47D (invasive ductal carcinoma)
ASB for transcription factors
HIF3A_HUMAN HIF1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HIF3A_HUMAN n/a 3.31 1.001.4·10-9 1.50 n/a n/a
HIF1A_HUMAN n/a 2.60 1.006.4·10-6 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Esophagus_Gastroesophageal_Junction Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Stomach Thyroid Whole_Blood

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