rs619030 chr10:11164318 G>A
- Sequence
ctttactgtttattcctgctcaaa[G/A]gagggtgggggcaagtgaaaaaga
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.77 | n/a | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP alzheimers disease, aortic valve calcium, comorbid depressive syndrome and alcohol dependence, homa-b, rheumatoid arthritis, schizophrenia, triglycerides