rs61933190 chr12:64451935 G>A
- Sequence
tcctcattcccctttagagtaaag[G/A]gcgagggcaacagtggacggggtg
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZN335_HUMAN ZN600_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN335_HUMAN | n/a | 2.60 | 2.00 | -1.15 | Weak Discordant | |||
| ZN600_HUMAN | n/a | 2.62 | 2.00 | n/a | n/a | |||
| ZBT17_HUMAN | n/a | 2.19 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Gastroesophageal_Junction, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Spleen, Testis, Whole_Blood