rs619423 chr1:5267768 T>C
- Sequence
ccctgctgtcagtgacggatctcc[T/C]gtaattcatatgcaaattggcatt
- ASB in cell types
- HUES64 (embryonic stem cells)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | 1.67 | -1.56 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, hdl cholesterol change with statins, total cholesterol change with statins