rs619679 chr12:120853954 A>C
- Sequence
aaacccaaaaccacatgaaaacaa[A/C]caccaccaccaccacacacacgca
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- IRF5_HUMAN MCM3_HUMAN ENL_HUMAN ARNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IRF5_HUMAN | -2.85 | 2.65 | 1.33 | n/a | n/a | |||
| MCM3_HUMAN | n/a | 2.73 | 2.00 | n/a | n/a | |||
| ENL_HUMAN | -0.07 | 1.26 | 1.78 | n/a | n/a | |||
| ARNT_HUMAN | -0.48 | 1.45 | 1.83 | n/a | No Hit |
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