rs62004988 chr15:60391410 G>A
- Sequence
agcaagggggaaggcctggggaga[G/A]gggaagaggaataatgccccaggg
- ASB in cell types
- K562 (myelogenous leukemia) periferal blood macrophages A549 (lung carcinoma)
- ASB for transcription factors
- SPI1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.98 | -2.44 | 2.00 | -1.84 | Weak Concordant | |||
| CTCF_HUMAN | 0.31 | 0.69 | 1.27 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
