rs62043630 chr16:77435814 G>A
- Sequence
atccagtttgctgtgtgcctgttc[G/A]tttactcaagacatttatttgatc
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.49 | -0.14 | 1.54 | -1.41 | Weak Concordant | |||
| FOXA1_HUMAN | 1.96 | -0.41 | 1.67 | n/a | No Hit |
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Motif analysis
