rs620751 chr17:39153115 C>A
- Sequence
cctctttccccagcctgcccaccc[C/A]ctgtctccgacctcctgccttcct
- ASB in cell types
- HepG2 (hepatoblastoma) A549 (lung carcinoma) GM12878 (female B-cells) epidermal keratinocytes
- ASB for transcription factors
- RAD21_HUMAN ZN592_HUMAN SMC3_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.09 | 1.35 | 2.87 | n/a | n/a | |||
| ZN592_HUMAN | 2.07 | -2.11 | 1.33 | n/a | n/a | |||
| SMC3_HUMAN | -0.40 | 0.99 | 3.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.71 | 0.58 | 1.66 | n/a | No Hit | |||
| RING2_HUMAN | -1.80 | 2.26 | 2.00 | n/a | n/a |
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