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rs62097515 chr18:12271829 G>C

Sequence
gctggagcaggaagccgccagcag[G/C]tgtctcgctccccggtcccagcgc
ASB in cell types
epithelial cell of prostate erythroid cells
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.99 -0.41 5.9·10-111.00 1.33 -4.74 Concordant
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Motif analysis

CTCF_HUMAN Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum

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