rs62138961 chr2:27584547 C>G
- Sequence
tagcagtctagaaggggagatagg[C/G]aagtaggtcaacacagttcattgt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN HINFP_HUMAN ARI1B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -0.49 | 1.81 | 1.78 | n/a | No Hit | |||
| HINFP_HUMAN | 2.34 | n/a | 2.50 | n/a | No Hit | |||
| ARI1B_HUMAN | -3.17 | 2.26 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Spleen