rs62143234 chr2:42796520 C>T
- Sequence
gggaattaactcttattataaaca[C/T]tgagtgtcagccctggttcttccg
- ASB in cell types
- GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells) | 0.55 | 0.47 | 1.34 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Colon_Transverse, Esophagus_Mucosa, Nerve_Tibial, Pituitary, Prostate, Whole_Blood