rs62179979 chr2:62578942 C>T
- Sequence
cccagggactctttcttaactctg[C/T]tcccctttgtgcatgtacatcatc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN JUN_HUMAN JUNB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.30 | 1.79 | 1.37 | n/a | No Hit | |||
| EP300_HUMAN | 0.04 | 1.61 | 1.57 | n/a | n/a | |||
| JUN_HUMAN | -0.20 | 0.90 | 1.33 | n/a | No Hit | |||
| JUNB_HUMAN | 0.00 | 1.25 | 1.58 | n/a | No Hit | |||
| CEBPB_HUMAN | -0.24 | 1.02 | 1.47 | n/a | No Hit |
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