rs62182790 chr2:218217086 G>A
- Sequence
cgctcgcgttcacgagtggttgaa[G/A]cggaaatggcgccgcggggccgcg
- ASB in cell types
- periferal blood macrophages thymus-derived CD34- cells
- ASB for transcription factors
- SPI1_HUMAN CTCF_HUMAN BC11B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 2.64 | -1.98 | 2.00 | -1.26 | Weak Concordant | |||
| CTCF_HUMAN | 0.14 | 0.73 | 1.24 | n/a | No Hit | |||
| BC11B_HUMAN | 1.42 | -0.90 | 2.25 | n/a | n/a |
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Motif analysis
