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rs62202841 chr20:50812155 T>C

Sequence
tttatttatttattttttttgaga[T/C]ggaatctcactctgttgcccaggc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZN444_HUMAN NRF1_HUMAN MAZ_HUMAN CLOCK_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN444_HUMAN n/a 2.43 1.000.01 4.00 n/a n/a
NRF1_HUMAN n/a 1.97 1.000.03 4.00 n/a No Hit
MAZ_HUMAN n/a 2.34 1.000.03 4.00 n/a No Hit
CLOCK_HUMAN n/a 2.15 1.000.03 4.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Testis Whole_Blood

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