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rs622180 chr19:56080944 T>C

Sequence
ccctctttcctcgcggctcagctt[T/C]tccgtccacttactcgcccgtgtt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN n/a 2.39 1.001.8·10-4 1.33 n/a n/a
CTCF_HUMAN 0.03 0.59 1.000.04 1.27 n/a No Hit
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Motif analysis

No data available

Genetic associations

No data available

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