rs62232102 chr3:5026868 T>A
- Sequence
tcaacctggccacgtgtctgggtc[T/A]atatgaagggctctcggtgcctcc
- ASB in cell types
- A549 (lung carcinoma) CD14+ monocytes
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN STAT1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.10 | -0.38 | 1.82 | n/a | n/a | |||
| RAD21_HUMAN | 1.25 | -0.05 | 1.92 | n/a | n/a | |||
| STAT1_HUMAN | 2.06 | n/a | 2.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.55 | 0.06 | 1.82 | n/a | No Hit |
Items per page:
1 – 4 of 4