rs622404 chr6:7130363 A>G
- Sequence
gaggcaaccgaagccaaggctgcc[A/G]taatccacgcgctctggacgtcac
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) CD14+ monocytes
- ASB for transcription factors
- GCR_HUMAN STAT1_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -1.24 | 1.60 | 1.42 | n/a | No Hit | |||
| STAT1_HUMAN | -2.56 | 2.41 | 2.50 | n/a | No Hit | |||
| CEBPB_HUMAN | 0.67 | 1.26 | 2.20 | n/a | No Hit |
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