rs62255734 chr3:78426889 A>G
- Sequence
acacaacatggcctgctagcaaat[A/G]tttgctaaataaatgaatgagaag
- ASB in cell types
- ZR-75-1 (invasive ductal carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.81 | -0.88 | 2.00 | 1.02 | Weak Discordant | |||
| ANDR_HUMAN | 1.83 | -1.77 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.39 | -0.57 | 2.00 | n/a | No Hit |
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Motif analysis
